BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038D02SP1|AL430527
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1439 1818 0.0
>3x_Contig1439
Length = 7662
Score = 1818 bits (917), Expect = 0.0
Identities = 917/917 (100%)
Strand = Plus / Minus
Query: 1 gatcgacactttgtcttccccatatatcttgaacaatttatcgatgatcatcggtacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5311 gatcgacactttgtcttccccatatatcttgaacaatttatcgatgatcatcggtacctt 5252
Query: 61 aatggtggcgacagaccccgttgcacctattagaatatgtactttttcatcatcctcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5251 aatggtggcgacagaccccgttgcacctattagaatatgtactttttcatcatcctcttt 5192
Query: 121 ttgaaacaattcggtaaaaggaacgtgtggttcctcttcactgattcgtttcttggtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5191 ttgaaacaattcggtaaaaggaacgtgtggttcctcttcactgattcgtttcttggtagt 5132
Query: 181 agccttcttggcggcgacggcagcgatggggtcattataatcaagagacgtggcagaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5131 agccttcttggcggcgacggcagcgatggggtcattataatcaagagacgtggcagaggg 5072
Query: 241 tgatagttcacggtccaggacacctgtcattttaggggacactgcgccatcaccaccgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5071 tgatagttcacggtccaggacacctgtcattttaggggacactgcgccatcaccaccgtt 5012
Query: 301 gcgcgtcccgttatttggtttagcttcgaaatagatgaaatcaccaggtatgtgcacaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5011 gcgcgtcccgttatttggtttagcttcgaaatagatgaaatcaccaggtatgtgcacaga 4952
Query: 361 gttctgacgagatgatccagctccagaagtattggcagtattagtagccgccgttgacgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4951 gttctgacgagatgatccagctccagaagtattggcagtattagtagccgccgttgacgt 4892
Query: 421 gttggtaacatgacccgtgtccggttcacgagttgtggaactgatagaattcactggtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4891 gttggtaacatgacccgtgtccggttcacgagttgtggaactgatagaattcactggtgt 4832
Query: 481 gatggtgggaggagcttcgctagaagaggctactgtggttggagtgcccaatttggtcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4831 gatggtgggaggagcttcgctagaagaggctactgtggttggagtgcccaatttggtcga 4772
Query: 541 tgagggtcttgtggaaatagaaagcctatgcgcaatgactttatcctgatgctcgggaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4771 tgagggtcttgtggaaatagaaagcctatgcgcaatgactttatcctgatgctcgggaac 4712
Query: 601 cgtgaatgatactgatgttgcagtcaagggtgtccttaacggtccatgtgatcctccttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4711 cgtgaatgatactgatgttgcagtcaagggtgtccttaacggtccatgtgatcctccttg 4652
Query: 661 ttctcttctctcaccaagtacatctctgtctgaatccctttcgccttctttctcagaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4651 ttctcttctctcaccaagtacatctctgtctgaatccctttcgccttctttctcagaaga 4592
Query: 721 cttagtcaccaactgcaacttttgaataagcttctggggattcacataatcgtgaccgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4591 cttagtcaccaactgcaacttttgaataagcttctggggattcacataatcgtgaccgtt 4532
Query: 781 cacaggttcataatttgggtgtctagctggtccacagcgtccagaaatctcttctatctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4531 cacaggttcataatttgggtgtctagctggtccacagcgtccagaaatctcttctatctt 4472
Query: 841 gcctaaacttacatttcttccttcaccagcatcggaaacagtgctggtattggagtttga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4471 gcctaaacttacatttcttccttcaccagcatcggaaacagtgctggtattggagtttga 4412
Query: 901 ccggttagtcaagatgg 917
|||||||||||||||||
Sbjct: 4411 ccggttagtcaagatgg 4395
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5405
Number of Sequences: 1807
Number of extensions: 5405
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)